motif translation graph for 1.1.1
posted by Yih-Shien | 8:42 AM
- Use Structure Superposition (using POSA)to find co...
- About Scop's New Version
- PLAN
- 3H
- 3G
- Pattern for 3E
- pattern for 3S*
- 3A not including 1kv3
- pattern for 3B
- why last strand close to first strand
3 Comments:
almost forgot how I got this graph,
check this file if I forgot again:
\050720\translate.xls Sheet4
almost forgot how to make this graph.
I use yED,
Layout-Organic-Smart
but still can't remember how I format the data in excel to tgf format
I think I can use sql command to join two table (this table to itself)in this format
1 1 1 1 1A
1 1 1 1 1B
1 1 1 2 3A
1 1 1 3 1A
and produce
1A 1A
1A 1B
1B 1B
3A 3A
1A 1A
then I should be able to produce the data for yED or graphviz
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