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Sunday, July 03, 2005

pattern for 2E

protiens in 2E also contents pattern:
P-X-[VLITAM]-X-[ILPTAV]-X(10,16)-[VLI]-X-C-X-[LMIAV]-X-X-[FILY]-X-P-X-X-[IAVL]-X-[VFTLIM]-X-[WLMF]-X(17,25)-[DNGST]-X-X-[YFW]-X(5)-[LVAT]-X-[LVFIM]-X(7,15)-[YVFIL]-X-C-X-[VAM]-X-[FH]-X(8,27)-[FLVIWAY]

seems like 2C => 2E
1265
8734

1254
763

2E only delete strand 4 in 2C, and it's not an importent strand in sandwich.

PS: proteins in 2C but in superfamily 2 doesn't contents that pattern.

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