foldminer

I tried Fold Miner, it's pretty interesting,
it use statistics to know what SSEs are more importent then other SSEs in a group.
the group can be any node in SCOP database.
it can automatically identify the interlock strands for 1bww.
PS: the statistics is based on whole SCOP database, it takes about 15 mins for one query.

tool
http://motif.stanford.edu/foldminer/
paper
http://www.pubmedcentral.gov/picrender.fcgi?artid=441527&blobtype=pdf