meeting 060420

1. alignment of all proteins in one motif:
 1. align by sequence
 2. align by structure
 3. align by h-bonds
 4. align by pattern
2. distances between conserved positions
 1. previous
 2. next
3. scan for patterns
 1. scanprosite
4. advantage
 1. supermotif
 2. prove: more conserved positions
5.

6. it depands on what they are doing, what is their database about?