kisterae

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Tuesday, September 12, 2006

contact map

contact map
http://wwwsup.scmbb.ulb.ac.be/~ocha/wwwsup1/fst.cgi

contact map
http://ligin.weizmann.ac.il/cma/

contact map to predict folding pathway
http://www.cs.rpi.edu/~zaki/BIOKDD02/02-hu.pdf#search=%22contact%20map%20beta%20sheets%22

predict contact map to predict strands
http://www.sanger.ac.uk/Users/th/papers/protpred94/protpred94-full.html

For more functions (Ca, Cb, Sidechain, Hydrophobic contacts,etc)
use BLUE STAR STING (Sting Millennium Suite)
http://trantor.bioc.columbia.edu/SMS/

posted by 蘇老師 | 4:59 PM | 0 comments

Saturday, September 02, 2006

wrong data in database

in d1k5ja_
position of strand 1 and 9 should be switched.

posted by 蘇老師 | 6:25 PM | 0 comments